Show simple item record

dc.contributor.authorPodlutskaya, Viktorija
dc.date.accessioned2022-12-20T22:01:30Z
dc.date.available2022-12-20T22:01:30Z
dc.date.issued2022-08
dc.identifier.urihttp://hdl.handle.net/11122/13089
dc.descriptionThesis (M.S.) University of Alaska Fairbanks, 2022en_US
dc.description.abstractCancer is a growing disease burden worldwide. Lifestyle and environmental factors are the largest contributors to cancer development (90-95%) in contrast to genetics (5-10% of cases,); of the environmental factors, infections contribute 15-20% of the "external" risk in developing cancer. In the US, breast cancer is the most common type of cancer with 284,000 new cases expected in 2021, with the next most common being prostate and lung cancer. Viruses have long been suspected to promote cancerous transformations. Kaposi Sarcoma Associated Herpesvirus (KSHV) is implicated in Kaposi Sarcoma (KS) cancer transformation and in vitro is found in BCBL1 cells. KSHV is a herpesvirus, also named Human Herpesvirus 8 (HHV8). The connection between viral infection and increase in cancer has been documented, but the details of cellular mechanisms involved therein are lacking. We hypothesize that during active viral infection, cellular DNA is not repaired properly, leading to the accumulation of DNA damage and mutations; these in turn, could lead to the transformation of normal, albeit virus-infected cells, into cancer-predisposed cells, and later tumor formation. The goal of this thesis was to investigate DNA repair during an active viral infection of HHV8. BCBL1 is a clonal lymphoma cell line isolated in 1995 from an HIV seronegative patient with a body cavity-based lymphoma. Chapter 1 is a mini review on what is known about this oncogenic virus, DNA repair pathways, and cancer and how these three relate to each other is discussed. Chapter 2 compares DNA repair dynamics of two distinct repair pathways in virally active cells versus virally dormant cells. Our research suggests that host processes controlling DNA repair mechanisms are manipulated to favor virus production. Chapter 3 is a general conclusion summarizing our significant findings from Chapter 2.en_US
dc.description.sponsorshipNational Institute of General Medical Sciences of the National Institutes of Health under grant number P20GM103395, National Institute of Minority Health and Health Disparities of the National Institutes of Health under Award TL4GM118992en_US
dc.description.tableofcontentsChapter 1: General introduction -- 1.1. KSHV virus background and capabilities -- 1.2. KS cancer and immune system implications -- 1.3. In vitro - the BCB1 cell line -- 1.4. DNA damage and repair pathways -- 1.5. Radiation induced damage and repair mechanisms -- 1.5.1. UV light -- 1.5.2. X-ray -- 1.6. HHV8 and DNA damage -- 1.7. Molecular components key to metabolic processes -- 1.8. Research objectives -- 1.9. Figures -- 1.10. References. Chapter 2: DNA repair and the response of virally infected cells -- 2.1. Abstract -- 2.2. Introduction -- 2.2.1. Cancer development & viral link -- 2.2.2. Looking within ourselves, an in-depth look at KSHV -- 2.2.3. DNA damage due to radiation exposure -- 2.2.4. Our project - increased DNA damage due to viral production -- 2.3. Methods and materials -- 2.3.1. Materials -- 2.3.2. Cell culture -- 2.3.3. Viral induction with TPA -- 2.3.4. Cellular viability -- 2.3.5. DNA damage and repair response (comet assay) -- 2.3.6. Qualitative & quantitative PCR -- 2.3.7. Statistical analysis & calculations -- 2.4. Results -- 2.4.1. TPA treatment activates infectious hhv8 gene expression -- 2.4.2. Host viability declines following viral activation -- 2.4.3. Ionizing radiation hinders the DNA damage repair-response -- 2.4.4. Prolonged disturbance in DNA damage repair-response in virally active cells following a single bout of UVC light exposure -- 2.5. Discussion -- 2.5.1. Host viability declines following viral activation -- 2.5.2. Viral activation hinders DNA damage repair-response -- 2.5.3. Virus suppression of DNA repair linked to non-cancerous diseases -- 2.5.4. Conclusions -- 2.5.5. Future direction -- 2.6. Figures -- 2.7. Tables -- 2.8. References. Chapter 3: General discussion -- 3.1. Significance of research contribution -- 3.2. Future direction -- 3.3. References. Appendices.en_US
dc.language.isoen_USen_US
dc.subjectDNA repairen_US
dc.subjectDNA damageen_US
dc.subjectOncogenic virusesen_US
dc.subjectKaposi's sarcomaen_US
dc.subjectHerpesvirusesen_US
dc.subject.otherMaster of Science in Chemistryen_US
dc.titleImpairment of DNA repair by oncogenic virus HHV8en_US
dc.typeThesisen_US
dc.type.degreemsen_US
dc.identifier.departmentDepartment of Chemistry and Biochemistryen_US
dc.contributor.chairWeltzin, Maegan
dc.contributor.committeeKuhn, Thomas
dc.contributor.committeeDrew, Kelly
dc.contributor.committeeOliver, Ryan


Files in this item

Thumbnail
Name:
Podlutskaya_V_2022.pdf
Size:
3.335Mb
Format:
PDF

This item appears in the following Collection(s)

Show simple item record